Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-548m in GCT Seminoma Korkola Cluster 56 Table contains all genes in the GCT Seminoma Korkola cluster number 56. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548m 347733 TUBB2B tubulin, beta 2B [Source:HGNC Symbol;Acc:30829] T 27067 STAU2 staufen, RNA binding protein, homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:11371] T 7570 ZNF22 zinc finger protein 22 (KOX 15) [Source:HGNC Symbol;Acc:13012] zzz999 10919 EHMT2 euchromatic histone-lysine N-methyltransferase 2 [Source:HGNC Symbol;Acc:14129] zzz999 83439 TCF7L1 transcription factor 7-like 1 (T-cell specific, HMG-box) [Source:HGNC Symbol;Acc:11640] zzz999 8079 MLF2 myeloid leukemia factor 2 [Source:HGNC Symbol;Acc:7126] T 51074 APIP APAF1 interacting protein [Source:HGNC Symbol;Acc:17581] zzz999 7855 FZD5 frizzled homolog 5 (Drosophila) [Source:HGNC Symbol;Acc:4043] P T 3704 ITPA inosine triphosphatase (nucleoside triphosphate pyrophosphatase) [Source:HGNC Symbol;Acc:6176] zzz999 3615 IMPDH2 IMP (inosine 5'-monophosphate) dehydrogenase 2 [Source:HGNC Symbol;Acc:6053] zzz999 2773 GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:HGNC Symbol;Acc:4387] T 10007 GNPDA1 glucosamine-6-phosphate deaminase 1 [Source:HGNC Symbol;Acc:4417] zzz999 4232 MEST mesoderm specific transcript homolog (mouse) [Source:HGNC Symbol;Acc:7028] T 56288 PARD3 par-3 partitioning defective 3 homolog (C. elegans) [Source:HGNC Symbol;Acc:16051] zzz999 10949 HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 [Source:HGNC Symbol;Acc:5030] T 10253 SPRY2 sprouty homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:11270] T 55344 PLCXD1 phosphatidylinositol-specific phospholipase C, X domain containing 1 [Source:HGNC Symbol;Acc:23148] zzz999 8241 RBM10 RNA binding motif protein 10 [Source:HGNC Symbol;Acc:9896] zzz999 6566 SLC16A1 solute carrier family 16, member 1 (monocarboxylic acid transporter 1) [Source:HGNC Symbol;Acc:10922] T 2029 ENSA endosulfine alpha [Source:HGNC Symbol;Acc:3360] P 29920 PYCR2 pyrroline-5-carboxylate reductase family, member 2 [Source:HGNC Symbol;Acc:30262] zzz999 5000 ORC4 origin recognition complex, subunit 4 [Source:HGNC Symbol;Acc:8490] T 54919 HEATR2 HEAT repeat containing 2 [Source:HGNC Symbol;Acc:26013] zzz999 79684 C11orf61 chromosome 11 open reading frame 61 [Source:HGNC Symbol;Acc:26266] zzz999 65109 UPF3B UPF3 regulator of nonsense transcripts homolog B (yeast) [Source:HGNC Symbol;Acc:20439] zzz999 6997 zzz999 Putative teratocarcinoma-derived growth factor 2 [Source:UniProtKB/Swiss-Prot;Acc:P51864] zzz999 7411 VBP1 von Hippel-Lindau binding protein 1 [Source:HGNC Symbol;Acc:12662] zzz999 2639 GCDH glutaryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:4189] zzz999 29102 DROSHA drosha, ribonuclease type III [Source:HGNC Symbol;Acc:17904] T 875 CBS cystathionine-beta-synthase [Source:HGNC Symbol;Acc:1550] zzz999 2260 FGFR1 fibroblast growth factor receptor 1 [Source:HGNC Symbol;Acc:3688] zzz999 7050 TGIF1 TGFB-induced factor homeobox 1 [Source:HGNC Symbol;Acc:11776] zzz999 738 C11orf2 chromosome 11 open reading frame 2 [Source:HGNC Symbol;Acc:1172] zzz999 657 BMPR1A bone morphogenetic protein receptor, type IA [Source:HGNC Symbol;Acc:1076] T 6624 FSCN1 fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus) [Source:HGNC Symbol;Acc:11148] zzz999 8772 FADD Fas (TNFRSF6)-associated via death domain [Source:HGNC Symbol;Acc:3573] zzz999 81848 SPRY4 sprouty homolog 4 (Drosophila) [Source:HGNC Symbol;Acc:15533] T 79070 KDELC1 KDEL (Lys-Asp-Glu-Leu) containing 1 [Source:HGNC Symbol;Acc:19350] T 8577 TMEFF1 transmembrane protein with EGF-like and two follistatin-like domains 1 [Source:HGNC Symbol;Acc:11866] zzz999 64710 NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 [Source:HGNC Symbol;Acc:29923] P T 10644 IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 [Source:HGNC Symbol;Acc:28867] zzz999 57541 ZNF398 zinc finger protein 398 [Source:HGNC Symbol;Acc:18373] zzz999 7873 MANF mesencephalic astrocyte-derived neurotrophic factor [Source:HGNC Symbol;Acc:15461] zzz999 9949 AMMECR1 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 [Source:HGNC Symbol;Acc:467] P T 204 AK2 adenylate kinase 2 [Source:HGNC Symbol;Acc:362] T 1207 CLNS1A chloride channel, nucleotide-sensitive, 1A [Source:HGNC Symbol;Acc:2080] T 7547 ZIC3 Zic family member 3 (odd-paired homolog, Drosophila) [Source:HGNC Symbol;Acc:12874] zzz999 5436 POLR2G polymerase (RNA) II (DNA directed) polypeptide G [Source:HGNC Symbol;Acc:9194] zzz999 56474 CTPS2 CTP synthase II [Source:HGNC Symbol;Acc:2520] T 389840 MAP3K15 mitogen-activated protein kinase kinase kinase 15 [Source:HGNC Symbol;Acc:31689] zzz999 3065 HDAC1 histone deacetylase 1 [Source:HGNC Symbol;Acc:4852] zzz999 55734 ZFP64 zinc finger protein 64 homolog (mouse) [Source:HGNC Symbol;Acc:15940] zzz999 3358 HTR2C 5-hydroxytryptamine (serotonin) receptor 2C [Source:HGNC Symbol;Acc:5295] zzz999 79084 WDR77 WD repeat domain 77 [Source:HGNC Symbol;Acc:29652] zzz999 6996 TDG thymine-DNA glycosylase [Source:HGNC Symbol;Acc:11700] T 55327 LIN7C lin-7 homolog C (C. elegans) [Source:HGNC Symbol;Acc:17789] T 7803 PTP4A1 protein tyrosine phosphatase type IVA, member 1 [Source:HGNC Symbol;Acc:9634] T 100133941 zzz999 zzz999 zzz999 54780 NSMCE4A non-SMC element 4 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:25935] zzz999 4192 MDK midkine (neurite growth-promoting factor 2) [Source:HGNC Symbol;Acc:6972] zzz999 51701 NLK nemo-like kinase [Source:HGNC Symbol;Acc:29858] zzz999 79707 NOL9 nucleolar protein 9 [Source:HGNC Symbol;Acc:26265] zzz999 51230 PHF20 PHD finger protein 20 [Source:HGNC Symbol;Acc:16098] P T 55486 PARL presenilin associated, rhomboid-like [Source:HGNC Symbol;Acc:18253] zzz999 27316 RBMX RNA binding motif protein, X-linked [Source:HGNC Symbol;Acc:9910] zzz999 7001 PRDX2 peroxiredoxin 2 [Source:HGNC Symbol;Acc:9353] zzz999 5608 MAP2K6 mitogen-activated protein kinase kinase 6 [Source:HGNC Symbol;Acc:6846] zzz999 81557 MAGED4 melanoma antigen family D, 4 [Source:HGNC Symbol;Acc:23793] zzz999 23266 LPHN2 latrophilin 2 [Source:HGNC Symbol;Acc:18582] zzz999 2239 GPC4 glypican 4 [Source:HGNC Symbol;Acc:4452] T 23463 ICMT isoprenylcysteine carboxyl methyltransferase [Source:HGNC Symbol;Acc:5350] zzz999 5631 PRPS1 phosphoribosyl pyrophosphate synthetase 1 [Source:HGNC Symbol;Acc:9462] zzz999 7150 TOP1 topoisomerase (DNA) I [Source:HGNC Symbol;Acc:11986] zzz999 2491 CENPI centromere protein I [Source:HGNC Symbol;Acc:3968] zzz999 51765 zzz999 Serine/threonine-protein kinase MST4 [Source:UniProtKB/Swiss-Prot;Acc:Q9P289] T 5420 PODXL podocalyxin-like [Source:HGNC Symbol;Acc:9171] T 4330 MN1 meningioma (disrupted in balanced translocation) 1 [Source:HGNC Symbol;Acc:7180] zzz999 5217 PFN2 profilin 2 [Source:HGNC Symbol;Acc:8882] T 9891 NUAK1 NUAK family, SNF1-like kinase, 1 [Source:HGNC Symbol;Acc:14311] zzz999 54478 FAM64A family with sequence similarity 64, member A [Source:HGNC Symbol;Acc:25483] zzz999 55146 ZDHHC4 zinc finger, DHHC-type containing 4 [Source:HGNC Symbol;Acc:18471] zzz999 2806 GOT2 glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2) [Source:HGNC Symbol;Acc:4433] zzz999 6611 SMS spermine synthase [Source:HGNC Symbol;Acc:11123] zzz999 5160 PDHA1 pyruvate dehydrogenase (lipoamide) alpha 1 [Source:HGNC Symbol;Acc:8806] zzz999 55634 ZNF673 zinc finger family member 673 [Source:HGNC Symbol;Acc:26007] T

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